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2007

Figaji AA, Fieggen AG, Sandler SJI, Argent AC, Le Roux PD, Peter JC. 2007. Intracranial pressure and cerebral oxygenation changes after decompressive craniectomy in a child with traumatic brain swelling.. Childs Nerv Syst. 23(11):1331-5.

Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund N T, Bublil EM, Ruppin E, Sharan R, Gershoni JM et al.. 2007. Pepitope: epitope mapping from affinity-selected peptides.. Bioinformatics. 23(23):3244-6.

Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund N T, Bublil EM, Ruppin E, Sharan R, Gershoni JM et al.. 2007. Pepitope: epitope mapping from affinity-selected peptides.. Bioinformatics. 23(23):3244-6.

Reguera G, Pollina RB, Nicoll JS, Lovley DR. 2007. Possible nonconductive role of Geobacter sulfurreducens pilus nanowires in biofilm formation.. J Bacteriol. 189(5):2125-7.

Holmes DE, Nevin KP, Woodard TL, Peacock AD, Lovley DR. 2007. Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell.. Int J Syst Evol Microbiol. 57(Pt 4):701-7.

Waldron PJ, Petsch ST, Martini AM, Nüsslein K, Nüslein K. 2007. Salinity constraints on subsurface archaeal diversity and methanogenesis in sedimentary rock rich in organic matter.. Appl Environ Microbiol. 73(13):4171-9.

Stern A, Doron-Faigenboim A, Erez E, Martz E, Bacharach E, Pupko T. 2007. Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach.. Nucleic Acids Res. 35(Web Server issue):W506-11.

2008

Postier B, DiDonato R, Nevin KP, Liu A, Frank B, Lovley D, Methe BA. 2008. Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.. J Microbiol Methods. 74(1):26-32.

Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Methé BA, Krushkal J. 2008. Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.

Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR. 2008. Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.

Haveman SA, Didonato RJ, Villanueva L, Shelobolina ES, Postier BL, Xu B, Liu A, Lovley DR. 2008. Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production.. Appl Environ Microbiol. 74(14):4277-84.

Izallalen M, Mahadevan R, Burgard A, Postier B, DiDonato R, Sun J, Schilling CH, Lovley DR. 2008. Geobacter sulfurreducens strain engineered for increased rates of respiration.. Metab Eng. 10(5):267-75.

Kim B-C, Postier BL, Didonato RJ, Chaudhuri SK, Nevin KP, Lovley DR. 2008. Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant.. Bioelectrochemistry. 73(1):70-5.

Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL. 2008. Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules.. Genome Biol. 9(8):R121.

2009

Krushkal J, Leang C, Barbe JF, Qu Y, Yan B, Puljic M, Adkins RM, Lovley DR. 2009. Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer.. Funct Integr Genomics. 9(1):15-25.

Rubinstein ND, Mayrose I, Martz E, Pupko T. 2009. Epitopia: a web-server for predicting B-cell epitopes.. BMC Bioinformatics. 10:287.

Junglen S, Kurth A, Kuehl H, Quan P-L, Ellerbrok H, Pauli G, Nitsche A, Nunn C, Rich SM, Lipkin WI et al.. 2009. Examining landscape factors influencing relative distribution of mosquito genera and frequency of virus infection.. Ecohealth. 6(2):239-49.

Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R. 2009. Genome-scale constraint-based modeling of Geobacter metallireducens.. BMC Syst Biol. 3:15.

Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B et al.. 2009. Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.

Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B et al.. 2009. Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.

Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J. 2009. GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.

Abd-Alla AMM, Vlak JM, Bergoin M, Maruniak JE, Parker A, Burand JP, Jehle JA, Boucias DG. 2009. Hytrosaviridae: a proposal for classification and nomenclature of a new insect virus family.. Arch Virol. 154(6):909-18.

Webley WC, Tilahun Y, Lay K, Patel K, Stuart ES, Andrzejewski C, Salva PS. 2009. Occurrence of Chlamydia trachomatis and Chlamydia pneumoniae in paediatric respiratory infections.. Eur Respir J. 33(2):360-7.

Rich SM, Leendertz FH, Xu G, LeBreton M, Djoko CF, Aminake MN, Takang EE, Diffo JLD, Pike BL, Rosenthal BM et al.. 2009. The origin of malignant malaria.. Proc Natl Acad Sci U S A. 106(35):14902-7.

Hedrick DB, Peacock AD, Lovley DR, Woodard TL, Nevin KP, Long PE, White DC. 2009. Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor.. J Ind Microbiol Biotechnol. 36(2):205-9.

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