Publications

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2012

Rotaru C, Woodard TL, Choi S, Nevin KP. 2012. Spatial heterogeneity of bacterial communities in sediments from an infiltration basin receiving highway runoff.. Microb Ecol. 64(2):461-73.

Malvankar NS, Mester T, Tuominen MT, Lovley DR. 2012. Supercapacitors based on c-type cytochromes using conductive nanostructured networks of living bacteria.. Chemphyschem. 13(2):463-8.

Unal B, Perry V R, Sheth M, Gomez-Alvarez V, Chin K-J, Nüsslein K. 2012. Trace elements affect methanogenic activity and diversity in enrichments from subsurface coal bed produced water.. Front Microbiol. 3:175.

He Y, Swaminathan A, Lopes JM. 2012. Transcription regulation of the Saccharomyces cerevisiae PHO5 gene by the Ino2p and Ino4p basic helix-loop-helix proteins.. Mol Microbiol. 83(2):395-407.

Richter LV, Sandler SJ, Weis RM. 2012. Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation.. J Bacteriol. 194(10):2551-63.

Fang B, Gon S, Park M-H, Kumar K-N, Rotello VM, Nüsslein K, Santore MM. 2012. Using flow to switch the valency of bacterial capture on engineered surfaces containing immobilized nanoparticles.. Langmuir. 28(20):7803-10.

2011

Holmes DE, Risso C, Smith JA, Lovley DR. 2011. Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus.. Appl Environ Microbiol. 77(17):5926-33.

Fang B, Gon S, Park M, Kumar K-N, Rotello VM, Nusslein K, Santore MM. 2011. Bacterial adhesion on hybrid cationic nanoparticle-polymer brush surfaces: ionic strength tunes capture from monovalent to multivalent binding.. Colloids Surf B Biointerfaces. 87(1):109-15.

Cassonnet P, Rolloy C, Neveu G, Vidalain P-O, Chantier T, Pellet J, Jones L, Muller M, Demeret C, Gaud G et al.. 2011. Benchmarking a luciferase complementation assay for detecting protein complexes. Nature Methods. 8:990–992.

Qian X, Mester T, Morgado L, Arakawa T, Sharma ML, Inoue K, Joseph C, Salgueiro CA, Maroney MJ, Lovley DR. 2011. Biochemical characterization of purified OmcS, a c-type cytochrome required for insoluble Fe(III) reduction in Geobacter sulfurreducens.. Biochim Biophys Acta. 1807(4):404-12.

Im J, Lee S-W, Yoon S, Dispirito AA, Semrau JD. 2011. Characterization of a novel facultative Methylocystis species capable of growth on methane, acetate and ethanol.. Environ Microbiol Rep. 3(2):174-81.

Deangelis KM, Allgaier M, Chavarria Y, Fortney JL, Hugenholtz P, Simmons B, Sublette K, Silver WL, Hazen TC. 2011. Characterization of trapped lignin-degrading microbes in tropical forest soil.. PLoS One. 6(4):e19306.

Patel KK, Salva PS, Webley WC. 2011. Colonization of paediatric lower respiratory tract with genital Mycoplasma species.. Respirology. 16(7):1081-7.

Deangelis KM, D'haeseleer P, Chivian D, Fortney JL, Khudyakov J, Simmons B, Woo H, Arkin AP, Davenport K W, Goodwin L et al.. 2011. Complete genome sequence of "Enterobacter lignolyticus" SCF1.. Stand Genomic Sci. 5(1):69-85.

Yoon S, Im J, Bandow N, Dispirito AA, Semrau JD. 2011. Constitutive expression of pMMO by Methylocystis strain SB2 when grown on multi-carbon substrates: implications for biodegradation of chlorinated ethenes.. Environ Microbiol Rep. 3(2):182-8.

Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR. 2011. A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.

Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS. 2011. Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).. Microb Biotechnol. 4(1):55-63.

Fang Y, Scheibe TD, Mahadevan R, Garg S, Long PE, Lovley DR. 2011. Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model.. J Contam Hydrol. 122(1-4):96-103.

Shi S, Richardson AE, O'Callaghan M, Deangelis KM, Jones EE, Stewart A, Firestone MK, Condron LM. 2011. Effects of selected root exudate components on soil bacterial communities.. FEMS Microbiol Ecol. 77(3):600-10.

Nevin KP, Hensley SA, Franks AE, Summers ZM, Ou J, Woodard TL, Snoeyenbos-West OL, Lovley DR. 2011. Electrosynthesis of organic compounds from carbon dioxide is catalyzed by a diversity of acetogenic microorganisms.. Appl Environ Microbiol. 77(9):2882-6.

Im J, Lee S-W, Bodrossy L, Barcelona MJ, Semrau JD. 2011. Field application of nitrogen and phenylacetylene to mitigate greenhouse gas emissions from landfill cover soils: effects on microbial community structure.. Appl Microbiol Biotechnol. 89(1):189-200.

Strycharz SM, Glaven RH, Coppi MV, Gannon SM, Perpetua LA, Liu A, Nevin KP, Lovley DR. 2011. Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.. Bioelectrochemistry. 80(2):142-50.

Krushkal J, Sontineni S, Leang C, Qu Y, Adkins RM, Lovley DR. 2011. Genome diversity of the TetR family of transcriptional regulators in a metal-reducing bacterial family Geobacteraceae and other microbial species.. OMICS. 15(7-8):495-506.

Zhuang K, Izallalen M, Mouser P, Richter H, Risso C, Mahadevan R, Lovley DR. 2011. Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.. ISME J. 5(2):305-16.

Lovley DR, Ueki T, Zhang T, Malvankar NS, Shrestha PM, Flanagan KA, Aklujkar M, Butler JE, Giloteaux L, Rotaru A-E et al.. 2011. Geobacter: the microbe electric's physiology, ecology, and practical applications.. Adv Microb Physiol. 59:1-100.

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