Publications

Export 176 results:

Filters: Keyword is Geobacter [Clear All Filters]

2007

Holmes DE, O'Neil RA, Vrionis HA, N'guessan LA, Ortiz-Bernad I, Larrahondo MJ, Adams LA, Ward JA, Nicoll JS, Nevin KP et al.. 2007. Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.. ISME J. 1(8):663-77.

2008

Postier B, DiDonato R, Nevin KP, Liu A, Frank B, Lovley D, Methe BA. 2008. Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.. J Microbiol Methods. 74(1):26-32.

Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Methé BA, Krushkal J. 2008. Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.

Tran HT, Krushkal J, Antommattei FM, Lovley DR, Weis RM. 2008. Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function.. BMC Genomics. 9:471.

Segura D, Mahadevan R, Juárez K, Lovley DR. 2008. Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens.. PLoS Comput Biol. 4(2):e36.

Richter H, McCarthy K, Nevin KP, Johnson JP, Rotello VM, Lovley DR. 2008. Electricity generation by Geobacter sulfurreducens attached to gold electrodes.. Langmuir. 24(8):4376-9.

Risso C, Van Dien SJ, Orloff A, Lovley DR, Coppi MV. 2008. Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens.. J Bacteriol. 190(7):2266-74.

Esteve-Núñez A, Sosnik J, Visconti P, Lovley DR. 2008. Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens.. Environ Microbiol. 10(2):497-505.

O'Neil RA, Holmes DE, Coppi MV, Adams LA, Larrahondo JM, Ward JE, Nevin KP, Woodard TL, Vrionis HA, N'guessan LA et al.. 2008. Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation.. Environ Microbiol. 10(5):1218-30.

Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR. 2008. Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.

Izallalen M, Mahadevan R, Burgard A, Postier B, DiDonato R, Sun J, Schilling CH, Lovley DR. 2008. Geobacter sulfurreducens strain engineered for increased rates of respiration.. Metab Eng. 10(5):267-75.

Shelobolina ES, Vrionis HA, Findlay RH, Lovley DR. 2008. Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.. Int J Syst Evol Microbiol. 58(Pt 5):1075-8.

Strycharz SM, Woodard TL, Johnson JP, Nevin KP, Sanford RA, Löffler FE, Lovley DR. 2008. Graphite electrode as a sole electron donor for reductive dechlorination of tetrachlorethene by Geobacter lovleyi.. Appl Environ Microbiol. 74(19):5943-7.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR. 2008. Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.

Kim B-C, Postier BL, Didonato RJ, Chaudhuri SK, Nevin KP, Lovley DR. 2008. Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant.. Bioelectrochemistry. 73(1):70-5.

Kim B-C, Lovley DR. 2008. Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens.. FEMS Microbiol Lett. 286(1):39-44.

Nevin KP, Richter H, Covalla SF, Johnson JP, Woodard TL, Orloff AL, Jia H, Zhang M, Lovley DR. 2008. Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells.. Environ Microbiol. 10(10):2505-14.

Ding Y-HR, Hixson KK, Aklujkar MA, Lipton MS, Smith RD, Lovley DR, Mester T. 2008. Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor.. Biochim Biophys Acta. 1784(12):1935-41.

2009

Nevin KP, Kim B-C, Glaven RH, Johnson JP, Woodard TL, Methé BA, Didonato RJ, Covalla SF, Franks AE, Liu A et al.. 2009. Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.. PLoS One. 4(5):e5628.

Scheibe TD, Mahadevan R, Fang Y, Garg S, Long PE, Lovley DR. 2009. Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.. Microb Biotechnol. 2(2):274-86.

Krushkal J, Leang C, Barbe JF, Qu Y, Yan B, Puljic M, Adkins RM, Lovley DR. 2009. Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer.. Funct Integr Genomics. 9(1):15-25.

Aklujkar M, Krushkal J, DiBartolo G, Lapidus A, Land ML, Lovley DR. 2009. The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens.. BMC Microbiol. 9:109.

Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R. 2009. Genome-scale constraint-based modeling of Geobacter metallireducens.. BMC Syst Biol. 3:15.

Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B et al.. 2009. Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.

Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J. 2009. GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.

Pages