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Philips J, Rabaey K, Lovley DR, Vargas M.\'a0 2017.\'a0\'a0Biofilm Formation by Clostridium ljungdahlii Is Induced by Sodium Chloride Stress: Experimental Evaluation and Transcriptome Analysis.. PLoS One. 12(1):e0170406.\par \par Holmes DE, Shrestha PM, Walker DJF, Dang Y, Nevin KP, Woodard TL, Lovley DR.\'a0 2017.\'a0\'a0Metatranscriptomic Evidence for Direct Interspecies Electron Transfer between Geobacter and Methanothrix Species in Methanogenic Rice Paddy Soils.. Appl Environ Microbiol. 83(9)\par \par Zhang T, Tremblay P-L, Chaurasia AKumar, Smith JA, Bain TS, Lovley DR.\'a0 2013.\'a0\'a0Anaerobic benzene oxidation via phenol in Geobacter metallireducens.. Appl Environ Microbiol. 79(24):7800-6.\par \par Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Ju\'e1rez K, Cho B-K, Elkins JG, Nevin KP, Barrett CL et al..\'a0 2013.\'a0\'a0Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.. Nat Commun. 4:1755.\par \par Holmes DE, Giloteaux L, Barlett M, Chavan MA, Smith JA, Williams KH, Wilkins M, Long P, Lovley DR.\'a0 2013.\'a0\'a0Molecular analysis of the in situ growth rates of subsurface Geobacter species.. Appl Environ Microbiol. 79(5):1646-53.\par \par Smith JA, Lovley DR, Tremblay P-L.\'a0 2013.\'a0\'a0Outer cell surface components essential for Fe(III) oxide reduction by Geobacter metallireducens.. Appl Environ Microbiol. 79(3):901-7.\par \par Holmes DE, Risso C, Smith JA, Lovley DR.\'a0 2011.\'a0\'a0Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus.. Appl Environ Microbiol. 77(17):5926-33.\par \par Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.\'a0 2011.\'a0\'a0A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.\par \par Miletto M, Williams KH, N'Guessan AL, Lovley DR.\'a0 2011.\'a0\'a0Molecular analysis of the metabolic rates of discrete subsurface populations of sulfate reducers.. Appl Environ Microbiol. 77(18):6502-9.\par \par Franks AE, Nevin KP, Glaven RH, Lovley DR.\'a0 2010.\'a0\'a0Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms.. ISME J. 4(4):509-19.\par \par Nevin KP, Kim B-C, Glaven RH, Johnson JP, Woodard TL, Meth\'e9 BA, Didonato RJ, Covalla SF, Franks AE, Liu A et al..\'a0 2009.\'a0\'a0Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.. PLoS One. 4(5):e5628.\par \par Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Ju\'e1rez K, N\'fa\'f1ez C, Reguera G, DiDonato R, Postier B et al..\'a0 2009.\'a0\'a0Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.\par \par Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.\'a0 2009.\'a0\'a0Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.\par \par Holmes DE, O'Neil RA, Chavan MA, N'guessan LA, Vrionis HA, Perpetua LA, Larrahondo JM, DiDonato R, Liu A, Lovley DR.\'a0 2009.\'a0\'a0Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.. ISME J. 3(2):216-30.\par \par Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR.\'a0 2008.\'a0\'a0Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.\par \par Haveman SA, Didonato RJ, Villanueva L, Shelobolina ES, Postier BL, Xu B, Liu A, Lovley DR.\'a0 2008.\'a0\'a0Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production.. Appl Environ Microbiol. 74(14):4277-84.\par \par Krushkal J, Yan B, DiDonato LN, Puljic M, Nevin KP, Woodard TL, Adkins RM, Meth\'e9 BA, Lovley DR.\'a0 2007.\'a0\'a0Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.. Funct Integr Genomics. 7(3):229-55.\par \par Coppi MV, O'Neil RA, Leang C, Kaufmann F, Meth\'e9 BA, Nevin KP, Woodard TL, Liu A, Lovley DR.\'a0 2007.\'a0\'a0Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction.. Microbiology. 153(Pt 10):3572-85.\par \par Yan B, N\'fa\'f1ez C, Ueki T, Esteve-N\'fa\'f1ez A, Puljic M, Adkins RM, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2006.\'a0\'a0Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.\par \par Gardocki ME, Bakewell M, Kamath D, Robinson K, Borovicka K, Lopes JM.\'a0 2005.\'a0\'a0Genomic analysis of PIS1 gene expression.. Eukaryot Cell. 4(3):604-14.\par \par }