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Paula FS, Rodrigues JLM, Zhou J, Wu L, Mueller RC, Mirza BS, Bohannan BJM, N\'fcsslein K, Deng Y, Tiedje JM et al..\'a0 2014.\'a0\'a0Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities.. Mol Ecol. 23(12):2988-99.\par \par Giloteaux L, Holmes DE, Williams KH, Wrighton KC, Wilkins MJ, Montgomery AP, Smith JA, Orellana R, Thompson CA, Roper TJ et al..\'a0 2013.\'a0\'a0Characterization and transcription of arsenic respiration and resistance genes during in situ uranium bioremediation.. ISME J. 7(2):370-83.\par \par Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Ju\'e1rez K, Cho B-K, Elkins JG, Nevin KP, Barrett CL et al..\'a0 2013.\'a0\'a0Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.. Nat Commun. 4:1755.\par \par Vriezen JAC, de Bruijn FJ, N\'fcsslein K.\'a0 2013.\'a0\'a0Identification and characterization of a NaCl-responsive genetic locus involved in survival during desiccation in Sinorhizobium meliloti.. Appl Environ Microbiol. 79(18):5693-700.\par \par Shrestha PMalla, Nevin KP, Shrestha M, Lovley DR.\'a0 2013.\'a0\'a0When is a microbial culture "pure"? Persistent cryptic contaminant escapes detection even with deep genome sequencing. mBio. 4(2):e00591-12.\par \par Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.\'a0 2011.\'a0\'a0A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.\par \par Aklujkar M, Young ND, Holmes D, Chavan M, Risso C, Kiss HE, Han CS, Land ML, Lovley DR.\'a0 2010.\'a0\'a0The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.. BMC Genomics. 11:490.\par \par Aklujkar M, Lovley DR.\'a0 2010.\'a0\'a0Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus.. BMC Evol Biol. 10:230.\par \par Voordeckers JW, Kim B-C, Izallalen M, Lovley DR.\'a0 2010.\'a0\'a0Role of Geobacter sulfurreducens outer surface c-type cytochromes in reduction of soil humic acid and anthraquinone-2,6-disulfonate.. Appl Environ Microbiol. 76(7):2371-5.\par \par Long J E, Renzette N, Centore RC, Sandler SJ.\'a0 2008.\'a0\'a0Differential requirements of two recA mutants for constitutive SOS expression in Escherichia coli K-12.. PLoS One. 3(12):e4100.\par \par Risso C, Meth\'e9 BA, Elifantz H, Holmes DE, Lovley DR.\'a0 2008.\'a0\'a0Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.\par \par Renzette N, Gumlaw N, Sandler SJ.\'a0 2007.\'a0\'a0DinI and RecX modulate RecA-DNA structures in Escherichia coli K-12.. Mol Microbiol. 63(1):103-15.\par \par Krushkal J, Yan B, DiDonato LN, Puljic M, Nevin KP, Woodard TL, Adkins RM, Meth\'e9 BA, Lovley DR.\'a0 2007.\'a0\'a0Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.. Funct Integr Genomics. 7(3):229-55.\par \par Nevin KP, Holmes DE, Woodard TL, Covalla SF, Lovley DR.\'a0 2007.\'a0\'a0Reclassification of Trichlorobacter thiogenes as Geobacter thiogenes comb. nov.. Int J Syst Evol Microbiol. 57(Pt 3):463-6.\par \par Yan B, N\'fa\'f1ez C, Ueki T, Esteve-N\'fa\'f1ez A, Puljic M, Adkins RM, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2006.\'a0\'a0Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.\par \par Izquierdo JA, N\'fcsslein K.\'a0 2006.\'a0\'a0Distribution of extensive nifH gene diversity across physical soil microenvironments.. Microb Ecol. 51(4):441-52.\par \par Kovacevic S, Anderson D, Morita YS, Patterson J, Haites R, McMillan BNI, Coppel R, McConville MJ, Billman-Jacobe H.\'a0 2006.\'a0\'a0Identification of a novel protein with a role in lipoarabinomannan biosynthesis in mycobacteria.. J Biol Chem. 281(14):9011-7.\par \par Kim B-C, Qian X, Leang C, Coppi MV, Lovley DR.\'a0 2006.\'a0\'a0Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens.. J Bacteriol. 188(8):3138-42.\par \par Reguera G, McCarthy KD, Mehta T, Nicoll JS, Tuominen MT, Lovley DR.\'a0 2005.\'a0\'a0Extracellular electron transfer via microbial nanowires.. Nature. 435(7045):1098-101.\par \par Holmes DE, Nevin KP, Lovley DR.\'a0 2004.\'a0\'a0Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov.. Int J Syst Evol Microbiol. 54(Pt 5):1591-9.\par \par Griffith KL, Wolf RE.\'a0 2004.\'a0\'a0Genetic evidence for pre-recruitment as the mechanism of transcription activation by SoxS of Escherichia coli: the dominance of DNA binding mutations of SoxS.. J Mol Biol. 344(1):1-10.\par \par Holmes DE, Nicoll JS, Bond DR, Lovley DR.\'a0 2004.\'a0\'a0Potential role of a novel psychrotolerant member of the family Geobacteraceae, Geopsychrobacter electrodiphilus gen. nov., sp. nov., in electricity production by a marine sediment fuel cell.. Appl Environ Microbiol. 70(10):6023-30.\par \par Griffith KL, Shah IM, Wolf RE.\'a0 2004.\'a0\'a0Proteolytic degradation of Escherichia coli transcription activators SoxS and MarA as the mechanism for reversing the induction of the superoxide (SoxRS) and multiple antibiotic resistance (Mar) regulons.. Mol Microbiol. 51(6):1801-16.\par \par N\'fa\'f1ez C, Adams L, Childers S, Lovley DR.\'a0 2004.\'a0\'a0The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens.. J Bacteriol. 186(16):5543-6.\par \par Meth\'e9 BA, Nelson KE, Eisen JA, Paulsen IT, Nelson W, Heidelberg JF, Wu D, Wu M, Ward N, Beanan MJ et al..\'a0 2003.\'a0\'a0Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.. Science. 302(5652):1967-9.\par \par Jara M, N\'fa\'f1ez C, Campoy S, Fern\'e1ndez de Henestrosa AR, Lovley DR, Barb\'e9 J.\'a0 2003.\'a0\'a0Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage.. J Bacteriol. 185(8):2493-502.\par \par Bazylinski DA, Dean AJ, Sch\'fcler D, Phillips EJ, Lovley DR.\'a0 2000.\'a0\'a0N2-dependent growth and nitrogenase activity in the metal-metabolizing bacteria, Geobacter and Magnetospirillum species.. Environ Microbiol. 2(3):266-73.\par \par Sandler SJ, Samra HS, Clark AJ.\'a0 1996.\'a0\'a0Differential suppression of priA2::kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC.. Genetics. 143(1):5-13.\par \par Sandler SJ.\'a0 1996.\'a0\'a0Overlapping functions for recF and priA in cell viability and UV-inducible SOS expression are distinguished by dnaC809 in Escherichia coli K-12.. Mol Microbiol. 19(4):871-80.\par \par Clark AJ, Sandler SJ.\'a0 1994.\'a0\'a0Homologous genetic recombination: the pieces begin to fall into place.. Crit Rev Microbiol. 20(2):125-42.\par \par Sandler SJ, Clark AJ.\'a0 1994.\'a0\'a0Mutational analysis of sequences in the recF gene of Escherichia coli K-12 that affect expression.. J Bacteriol. 176(13):4011-6.\par \par Sandler SJ.\'a0 1994.\'a0\'a0Studies on the mechanism of reduction of UV-inducible sulAp expression by recF overexpression in Escherichia coli K-12.. Mol Gen Genet. 245(6):741-9.\par \par Sandler SJ, Clark AJ.\'a0 1993.\'a0\'a0Use of high and low level overexpression plasmids to test mutant alleles of the recF gene of Escherichia coli K-12 for partial activity.. Genetics. 135(3):643-54.\par \par Sandler SJ, Chackerian B, Li JT, Clark AJ.\'a0 1992.\'a0\'a0Sequence and complementation analysis of recF genes from Escherichia coli, Salmonella typhimurium, Pseudomonas putida and Bacillus subtilis: evidence for an essential phosphate binding loop.. Nucleic Acids Res. 20(4):839-45.\par \par Sandler SJ, Clark AJ.\'a0 1990.\'a0\'a0Factors affecting expression of the recF gene of Escherichia coli K-12.. Gene. 86(1):35-43.\par \par Clark AJ, Sandler SJ, Willis DK, Chu CC, Blanar MA, Lovett ST.\'a0 1984.\'a0\'a0Genes of the RecE and RecF pathways of conjugational recombination in Escherichia coli.. Cold Spring Harb Symp Quant Biol. 49:453-62.\par \par Blanar MA, Sandler SJ, Armengod ME, Ream LW, Clark AJ.\'a0 1984.\'a0\'a0Molecular analysis of the recF gene of Escherichia coli.. Proc Natl Acad Sci U S A. 81(15):4622-6.\par \par }